| 1 | Santa Fe HighSANTA FE | High | 1,599 |
| 2 | Capital HighSANTA FE | High | 1,376 |
| 3 | El Camino Real Academy CommunitySANTA FE | Primary | 715 |
| 4 | Nina Otero Community SchoolSANTA FE | Primary | 644 |
| 5 | Pinon ElementarySANTA FE | Primary | 519 |
| 6 | Edward Ortiz MiddleSANTA FE | Middle | 447 |
| 7 | Ramirez Thomas ElementarySANTA FE | Primary | 417 |
| 8 | Academy for Technology & ClassicsSANTA FE | High | 396 |
| 9 | El Dorado Community SchoolSANTA FE | Primary | 392 |
| 10 | Amy Biehl Community School at Rancho ViejoSANTA FE | Primary | 342 |
| 11 | Milagro MiddleSANTA FE | Middle | 330 |
| 12 | Kearny ElementarySANTA FE | Primary | 322 |
| 13 | Carlos Gilbert ElementarySANTA FE | Primary | 315 |
| 14 | Gonzales ElementarySANTA FE | Primary | 306 |
| 15 | Aspen Community SchoolSANTA FE | Other | 304 |
| 16 | Mandela International Magnet (Mims)SANTA FE | High | 301 |
| 17 | Wood-Gormley ElementarySANTA FE | Primary | 299 |
| 18 | Cesar Chavez ElementarySANTA FE | Primary | 291 |
| 19 | R.M. Sweeney ElementarySANTA FE | Primary | 283 |
| 20 | Desert Sage AcademySANTA FE | Other | 281 |
| 21 | Atalaya ElementarySANTA FE | Primary | 272 |
| 22 | Salazar ElementarySANTA FE | Primary | 229 |
| 23 | Chaparral ElementarySANTA FE | Primary | 195 |
| 24 | E.J. Martinez ElementarySANTA FE | Primary | 173 |
| 25 | Acequia Madre ElementarySANTA FE | Primary | 164 |
| 26 | Francis X. Nava ElementarySANTA FE | Primary | 154 |
| 27 | Nye Early ChildhoodSANTA FE | -- | 135 |
| 28 | Early College OpportunitiesSANTA FE | High | 120 |
| 29 | Tesuque ElementaryTESUQUE | Primary | 68 |
| 30 | Santa Fe EngageSANTA FE | High | 0 |